Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 AC004263.2-201ENST00000617183 678 ntBASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 AC135776.1-201ENST00000319817 2481 ntBASIC18.37■□□□□ 0.53
PCDHB9Q9Y5E1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 AC008687.5-201ENST00000593746 558 ntBASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 KRT89P-201ENST00000620027 1478 ntBASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB9Q9Y5E1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 BCL2-203ENST00000589955 5011 ntBASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 AL662844.1-201ENST00000546340 181 ntBASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 RNF126P1-202ENST00000569893 925 ntBASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCDHB9Q9Y5E1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 FOSL1P1-201ENST00000511041 816 ntBASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 AC079416.2-201ENST00000625035 1193 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms