Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 MYLKP1-201ENST00000509077 1580 ntBASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 AL162741.1-201ENST00000565563 1558 ntBASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FNDC3AQ9Y2H6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 AC112777.1-201ENST00000540175 1423 ntBASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 KRT8P50-201ENST00000562022 1438 ntBASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 AP000347.1-202ENST00000435868 847 ntBASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 AC079602.3-201ENST00000623931 403 ntBASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 KRT8P10-201ENST00000450021 1447 ntBASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.49■□□□□ 0.55
FNDC3AQ9Y2H6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 FAAHP1-202ENST00000446499 1238 ntBASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 KRT8P26-201ENST00000534154 1276 ntBASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FNDC3AQ9Y2H6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FNDC3AQ9Y2H6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms