Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 SLC25A6P4-201ENST00000586535 553 ntBASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.45■□□□□ 0.7
SSX2IPQ9Y2D8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 AC009102.3-201ENST00000623118 1491 ntBASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 AP005901.3-202ENST00000581653 237 ntBASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 AC083906.6-201ENST00000641366 219 ntBASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX2IPQ9Y2D8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 AL022342.1-201ENST00000400363 863 ntBASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX2IPQ9Y2D8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX2IPQ9Y2D8 AL591684.3-201ENST00000605187 298 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms