Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 LBH-204ENST00000406087 559 ntTSL 4 BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 AC107918.4-202ENST00000641623 219 ntBASIC23.54■■□□□ 1.36
SPG7Q9UQ90 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SPG7Q9UQ90 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 RNA5SP415-201ENST00000517246 115 ntBASIC23.53■■□□□ 1.36
SPG7Q9UQ90 AC105339.3-201ENST00000560043 636 ntBASIC23.53■■□□□ 1.36
SPG7Q9UQ90 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 AC140113.2-201ENST00000604370 208 ntBASIC23.53■■□□□ 1.36
SPG7Q9UQ90 Z83851.2-201ENST00000609564 659 ntBASIC23.53■■□□□ 1.36
SPG7Q9UQ90 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
SPG7Q9UQ90 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 MED15P5-201ENST00000423150 992 ntBASIC23.52■■□□□ 1.36
SPG7Q9UQ90 AL591424.1-201ENST00000442569 1213 ntBASIC23.52■■□□□ 1.36
SPG7Q9UQ90 MSRA-206ENST00000521209 814 ntTSL 3 BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
SPG7Q9UQ90 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 AL356488.2-201ENST00000602755 427 ntBASIC23.51■■□□□ 1.35
SPG7Q9UQ90 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SPG7Q9UQ90 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 AC096633.1-201ENST00000422446 749 ntBASIC23.5■■□□□ 1.35
SPG7Q9UQ90 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 ESPNP-201ENST00000270691 2015 ntBASIC23.5■■□□□ 1.35
SPG7Q9UQ90 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SPG7Q9UQ90 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SPG7Q9UQ90 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms