Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 HCG11-201ENST00000411553 5696 ntBASIC17.09■□□□□ 0.33
LHX6Q9UPM6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 HLA-V-201ENST00000429037 534 ntBASIC17.09■□□□□ 0.33
LHX6Q9UPM6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 KRT8P3-201ENST00000519669 1449 ntBASIC17.09■□□□□ 0.33
LHX6Q9UPM6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LHX6Q9UPM6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX6Q9UPM6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX6Q9UPM6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX6Q9UPM6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LHX6Q9UPM6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX6Q9UPM6 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LHX6Q9UPM6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 RCN1P2-201ENST00000398357 915 ntBASIC17.08■□□□□ 0.32
LHX6Q9UPM6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 MCCD1P2-201ENST00000423228 335 ntBASIC17.08■□□□□ 0.32
LHX6Q9UPM6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 MIR4745-201ENST00000577608 62 ntBASIC17.08■□□□□ 0.32
LHX6Q9UPM6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.08■□□□□ 0.32
LHX6Q9UPM6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LHX6Q9UPM6 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms