Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 AC111152.3-201ENST00000569699 673 ntBASIC19.07■□□□□ 0.64
CDH9Q9ULB4 BNIP3P18-201ENST00000593976 575 ntBASIC19.07■□□□□ 0.64
CDH9Q9ULB4 AL138831.2-201ENST00000606564 490 ntBASIC19.07■□□□□ 0.64
CDH9Q9ULB4 AL691432.3-201ENST00000621860 400 ntBASIC19.07■□□□□ 0.64
CDH9Q9ULB4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.07■□□□□ 0.64
CDH9Q9ULB4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 KRT16P4-201ENST00000453883 522 ntBASIC19.06■□□□□ 0.64
CDH9Q9ULB4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 AC009533.2-201ENST00000543664 586 ntBASIC19.06■□□□□ 0.64
CDH9Q9ULB4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 AL732292.2-201ENST00000609649 430 ntBASIC19.06■□□□□ 0.64
CDH9Q9ULB4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 AC009113.1-201ENST00000570267 2443 ntBASIC19.06■□□□□ 0.64
CDH9Q9ULB4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 AC125634.1-201ENST00000438758 1403 ntBASIC19.06■□□□□ 0.64
CDH9Q9ULB4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.06■□□□□ 0.64
CDH9Q9ULB4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.05■□□□□ 0.64
CDH9Q9ULB4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDH9Q9ULB4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH9Q9ULB4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH9Q9ULB4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH9Q9ULB4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDH9Q9ULB4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.04■□□□□ 0.64
CDH9Q9ULB4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDH9Q9ULB4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms