Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 AC005052.1-201ENST00000625181 2492 ntBASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 GUSBP6-202ENST00000438529 1198 ntBASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.31■□□□□ 0.04
UBQLN2Q9UHD9 AL136379.1-201ENST00000623471 2642 ntBASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 MIPEPP3-201ENST00000412105 444 ntBASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 CROCCP2-202ENST00000412962 2773 ntBASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBQLN2Q9UHD9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 PCDHB17P-201ENST00000539533 2393 ntBASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 SAPCD2P1-201ENST00000395413 1184 ntBASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 LSM12P1-201ENST00000411836 588 ntBASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 AL512625.2-201ENST00000417533 625 ntBASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.29■□□□□ 0.04
UBQLN2Q9UHD9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms