Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 AC026396.1-201ENST00000419388 421 ntBASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 FAAHP1-202ENST00000446499 1238 ntBASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 AC005336.2-201ENST00000593183 939 ntBASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 BNIP3P18-201ENST00000593976 575 ntBASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 PHGDH-209ENST00000641074 1780 ntBASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE7Q9UBL6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 EMBP1-201ENST00000458200 901 ntBASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 AC096582.2-201ENST00000510860 516 ntBASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 AC132938.6-201ENST00000623828 1655 ntBASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE7Q9UBL6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CPNE7Q9UBL6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 AC138932.1-201ENST00000534164 6830 ntBASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CPNE7Q9UBL6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms