Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC11.83□□□□□ -0.52
LINC00474Q9P2X8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 CROCCP3-202ENST00000420820 1947 ntBASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 TERF1P1-201ENST00000311003 1181 ntBASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 MIR149-201ENST00000384879 89 ntBASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 HOMER2P1-201ENST00000455653 964 ntBASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 AL138966.2-201ENST00000621997 464 ntBASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
LINC00474Q9P2X8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AL138781.2-201ENST00000617896 1843 ntBASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AC073592.3-201ENST00000625118 1834 ntBASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 PKD1P5-201ENST00000532415 10291 ntBASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 INGX-201ENST00000359239 846 ntBASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 FAM8A6P-201ENST00000407496 1135 ntBASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
LINC00474Q9P2X8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms