Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
CHD7Q9P2D1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 IGLL3P-201ENST00000412472 434 ntBASIC19.06■□□□□ 0.64
CHD7Q9P2D1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 AJ011932.1-201ENST00000621707 465 ntBASIC19.06■□□□□ 0.64
CHD7Q9P2D1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 AL035252.4-201ENST00000624174 288 ntBASIC19.06■□□□□ 0.64
CHD7Q9P2D1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHD7Q9P2D1 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 SPDYE21P-201ENST00000413323 827 ntBASIC19.05■□□□□ 0.64
CHD7Q9P2D1 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 OR7E47P-204ENST00000575924 449 ntBASIC19.05■□□□□ 0.64
CHD7Q9P2D1 AC006557.2-201ENST00000592985 1240 ntBASIC19.05■□□□□ 0.64
CHD7Q9P2D1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 KRT18P65-201ENST00000439811 1286 ntBASIC19.05■□□□□ 0.64
CHD7Q9P2D1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 LINC01126-201ENST00000623515 1646 ntBASIC19.05■□□□□ 0.64
CHD7Q9P2D1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 PRYP5-201ENST00000451909 266 ntBASIC19.05■□□□□ 0.64
CHD7Q9P2D1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 METTL23-205ENST00000588302 925 ntTSL 5 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHD7Q9P2D1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 CEND1P1-201ENST00000451006 455 ntBASIC19.04■□□□□ 0.64
CHD7Q9P2D1 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.04■□□□□ 0.64
CHD7Q9P2D1 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 AL390955.2-201ENST00000603032 514 ntBASIC19.03■□□□□ 0.64
CHD7Q9P2D1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CHD7Q9P2D1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms