Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.23■□□□□ 0.03
KCNIP1Q9NZI2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP1Q9NZI2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.23■□□□□ 0.03
KCNIP1Q9NZI2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KCNIP1Q9NZI2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 SDHAP2-201ENST00000455183 2001 ntBASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 PHGDH-209ENST00000641074 1780 ntBASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 MIR3180-4-201ENST00000582223 153 ntBASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 AC010653.2-201ENST00000623505 997 ntBASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 AC092338.2-201ENST00000568827 1415 ntBASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KCNIP1Q9NZI2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
KCNIP1Q9NZI2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
KCNIP1Q9NZI2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 AL390955.1-201ENST00000428694 934 ntBASIC15.2■□□□□ 0.02
KCNIP1Q9NZI2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms