Protein–RNA interactions for Protein: Q9NVH0

EXD2, Exonuclease 3'-5' domain-containing protein 2, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD2Q9NVH0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 MIR4674-201ENST00000582457 87 ntBASIC17.19■□□□□ 0.34
EXD2Q9NVH0 MIR4497-201ENST00000583208 89 ntBASIC17.19■□□□□ 0.34
EXD2Q9NVH0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.19■□□□□ 0.34
EXD2Q9NVH0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 AL390955.1-201ENST00000428694 934 ntBASIC17.18■□□□□ 0.34
EXD2Q9NVH0 AL355075.4-201ENST00000554988 638 ntBASIC17.18■□□□□ 0.34
EXD2Q9NVH0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 AC092338.2-201ENST00000568827 1415 ntBASIC17.18■□□□□ 0.34
EXD2Q9NVH0 HOXB1-202ENST00000577092 1414 ntBASIC17.18■□□□□ 0.34
EXD2Q9NVH0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
EXD2Q9NVH0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 AC138028.4-201ENST00000564984 1845 ntBASIC17.17■□□□□ 0.34
EXD2Q9NVH0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 KRT18P23-201ENST00000435622 1283 ntBASIC17.17■□□□□ 0.34
EXD2Q9NVH0 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 AC009065.1-201ENST00000564055 1225 ntBASIC17.17■□□□□ 0.34
EXD2Q9NVH0 WWOX-216ENST00000569818 525 ntBASIC17.17■□□□□ 0.34
EXD2Q9NVH0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 AC010653.2-201ENST00000623505 997 ntBASIC17.17■□□□□ 0.34
EXD2Q9NVH0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.17■□□□□ 0.34
EXD2Q9NVH0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.16■□□□□ 0.34
EXD2Q9NVH0 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.16■□□□□ 0.34
EXD2Q9NVH0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms