Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC21.21■□□□□ 0.998e-6■■□□□ 11.9
DROSHAQ9NRR4 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.988e-6■■□□□ 11.9
DROSHAQ9NRR4 CYSTM1-202ENST00000504227 588 ntTSL 521.05■□□□□ 0.968e-6■■□□□ 11.9
DROSHAQ9NRR4 CYSTM1-204ENST00000509789 813 ntTSL 421.05■□□□□ 0.968e-6■■□□□ 11.9
DROSHAQ9NRR4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.98e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC20.24■□□□□ 0.838e-6■■□□□ 11.9
DROSHAQ9NRR4 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.828e-6■■□□□ 11.9
DROSHAQ9NRR4 AC073111.5-201ENST00000641330 2582 nt19.91■□□□□ 0.788e-6■■□□□ 11.9
DROSHAQ9NRR4 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC19.69■□□□□ 0.748e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC19.4■□□□□ 0.78e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC19.38■□□□□ 0.698e-6■■□□□ 11.9
DROSHAQ9NRR4 CDC20-203ENST00000478882 755 ntTSL 218.89■□□□□ 0.618e-6■■□□□ 11.9
DROSHAQ9NRR4 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.588e-6■■□□□ 11.9
DROSHAQ9NRR4 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC18.2■□□□□ 0.58e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC18.19■□□□□ 0.58e-6■■□□□ 11.9
DROSHAQ9NRR4 KIF22-207ENST00000568312 781 ntTSL 318.15■□□□□ 0.58e-6■■□□□ 11.9
DROSHAQ9NRR4 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC18.11■□□□□ 0.498e-6■■□□□ 11.9
DROSHAQ9NRR4 MRPL22-207ENST00000523037 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.458e-6■■□□□ 11.9
DROSHAQ9NRR4 CDC16-201ENST00000252457 2034 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.418e-6■■□□□ 11.9
DROSHAQ9NRR4 CDC16-205ENST00000375308 2034 ntTSL 1 (best) BASIC17.63■□□□□ 0.418e-6■■□□□ 11.9
DROSHAQ9NRR4 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.398e-6■■□□□ 11.9
DROSHAQ9NRR4 AC004674.1-201ENST00000458400 739 ntBASIC17.4■□□□□ 0.388e-6■■□□□ 11.9
DROSHAQ9NRR4 PSMG2-207ENST00000586587 711 ntTSL 317.28■□□□□ 0.368e-6■■□□□ 11.9
DROSHAQ9NRR4 AC073111.5-202ENST00000641849 576 nt16.86■□□□□ 0.298e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.288e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC16.63■□□□□ 0.258e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC16.6■□□□□ 0.258e-6■■□□□ 11.9
DROSHAQ9NRR4 CYSTM1-203ENST00000509589 665 ntTSL 316.55■□□□□ 0.248e-6■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-201ENST00000304332 1881 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.218e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.218e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.188e-6■■□□□ 11.9
DROSHAQ9NRR4 RPL22-201ENST00000234875 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.148e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-208ENST00000615676 5092 ntTSL 1 (best)15.88■□□□□ 0.138e-6■■□□□ 11.9
DROSHAQ9NRR4 ANKLE2-207ENST00000539605 10890 ntTSL 1 (best)15.86■□□□□ 0.138e-6■■□□□ 11.9
DROSHAQ9NRR4 CDC16-208ENST00000484907 1038 ntTSL 315.82■□□□□ 0.128e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.098e-6■■□□□ 11.9
DROSHAQ9NRR4 MRPL58-202ENST00000580800 513 ntTSL 315.4■□□□□ 0.068e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-223ENST00000622612 4995 ntTSL 5 BASIC15.26■□□□□ 0.038e-6■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-215ENST00000510038 1314 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.028e-6■■□□□ 11.9
DROSHAQ9NRR4 AP3D1-208ENST00000590683 723 ntTSL 514.8□□□□□ -0.048e-6■■□□□ 11.9
DROSHAQ9NRR4 PSMG2-210ENST00000590217 1036 ntTSL 1 (best) BASIC14.73□□□□□ -0.058e-6■■□□□ 11.9
DROSHAQ9NRR4 KIAA0355-203ENST00000588338 561 ntTSL 514.68□□□□□ -0.068e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC14.66□□□□□ -0.068e-6■■□□□ 11.9
DROSHAQ9NRR4 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.068e-6■■□□□ 11.9
DROSHAQ9NRR4 STMN3-205ENST00000634126 605 ntTSL 314.5□□□□□ -0.095e-6■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-205ENST00000451949 1744 ntTSL 214.16□□□□□ -0.148e-6■■□□□ 11.9
DROSHAQ9NRR4 YTHDF3-210ENST00000617952 420 ntTSL 314.06□□□□□ -0.168e-6■■□□□ 11.9
DROSHAQ9NRR4 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.298e-6■■□□□ 11.9
DROSHAQ9NRR4 RPL22-202ENST00000462296 600 ntTSL 313.08□□□□□ -0.318e-6■■□□□ 11.9
DROSHAQ9NRR4 MRPL22-202ENST00000439747 784 ntTSL 2 BASIC12.74□□□□□ -0.378e-6■■□□□ 11.9
DROSHAQ9NRR4 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC12.48□□□□□ -0.418e-6■■□□□ 11.9
DROSHAQ9NRR4 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.438e-6■■□□□ 11.9
DROSHAQ9NRR4 RPL22-208ENST00000497965 786 ntTSL 2 BASIC12.09□□□□□ -0.478e-6■■□□□ 11.9
DROSHAQ9NRR4 CLN8-201ENST00000331222 7169 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.58e-6■■□□□ 11.9
DROSHAQ9NRR4 AFDN-210ENST00000423229 1807 ntTSL 1 (best)11.87□□□□□ -0.518e-6■■□□□ 11.9
DROSHAQ9NRR4 H2AFY-218ENST00000512507 10982 ntTSL 1 (best)10.12□□□□□ -0.798e-6■■□□□ 11.9
DROSHAQ9NRR4 ACTL6A-214ENST00000494843 591 ntTSL 210.11□□□□□ -0.798e-6■■□□□ 11.9
DROSHAQ9NRR4 PWWP2A-203ENST00000520662 407 ntTSL 39.67□□□□□ -0.868e-6■■□□□ 11.9
DROSHAQ9NRR4 PSMG2-206ENST00000586445 646 ntTSL 59.5□□□□□ -0.898e-6■■□□□ 11.9
DROSHAQ9NRR4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.118e-6■■□□□ 11.9
DROSHAQ9NRR4 MRPL22-204ENST00000519059 511 ntTSL 27.08□□□□□ -1.288e-6■■□□□ 11.9
DROSHAQ9NRR4 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.328e-6■■□□□ 11.9
DROSHAQ9NRR4 ATP5L-203ENST00000527186 1582 ntTSL 26.63□□□□□ -1.356e-17■■□□□ 11.9
DROSHAQ9NRR4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC6.63□□□□□ -1.358e-6■■□□□ 11.9
DROSHAQ9NRR4 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.78□□□□□ -1.648e-6■■□□□ 11.9
DROSHAQ9NRR4 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC19.18■□□□□ 0.668e-7■■□□□ 11.9
DROSHAQ9NRR4 MIR4664-201ENST00000583819 71 ntBASIC15.65■□□□□ 0.11e-8■■□□□ 11.9
DROSHAQ9NRR4 HSF4-204ENST00000517729 556 ntTSL 530.5■■■□□ 2.475e-10■■□□□ 11.9
DROSHAQ9NRR4 HSF4-205ENST00000517750 546 ntTSL 523.77■■□□□ 1.45e-10■■□□□ 11.9
DROSHAQ9NRR4 HSF4-208ENST00000519224 637 ntTSL 520.9■□□□□ 0.945e-10■■□□□ 11.9
DROSHAQ9NRR4 YWHAH-206ENST00000479649 662 ntTSL 317.45■□□□□ 0.383e-10■■□□□ 11.9
DROSHAQ9NRR4 TMC6-221ENST00000592063 743 ntTSL 522.04■■□□□ 1.122e-10■■□□□ 11.9
DROSHAQ9NRR4 CTSB-206ENST00000524500 573 ntTSL 428.88■■■□□ 2.212e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-233ENST00000534636 633 ntTSL 428.78■■■□□ 2.22e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-226ENST00000532656 573 ntTSL 427.21■■□□□ 1.952e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-222ENST00000531551 1855 ntTSL 1 (best)26.79■■□□□ 1.882e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.832e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC25.47■■□□□ 1.672e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-210ENST00000526195 560 ntTSL 424.73■■□□□ 1.552e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-213ENST00000527215 545 ntTSL 424.7■■□□□ 1.552e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.492e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.452e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-208ENST00000525076 550 ntTSL 523.98■■□□□ 1.432e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-230ENST00000534149 524 ntTSL 423.96■■□□□ 1.432e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.412e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.392e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.352e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-221ENST00000531502 557 ntTSL 422.96■■□□□ 1.272e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-224ENST00000532392 570 ntTSL 422.24■■□□□ 1.152e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-231ENST00000534382 764 ntTSL 422.24■■□□□ 1.152e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-217ENST00000530296 561 ntTSL 421.49■■□□□ 1.032e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-212ENST00000526645 559 ntTSL 417.61■□□□□ 0.412e-6■■□□□ 11.9
DROSHAQ9NRR4 CTSB-205ENST00000505496 540 ntTSL 413.45□□□□□ -0.262e-6■■□□□ 11.9
DROSHAQ9NRR4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC32.98■■■□□ 2.873e-6■■□□□ 11.9
DROSHAQ9NRR4 GYG2-208ENST00000520904 624 ntTSL 332.64■■■□□ 2.823e-6■■□□□ 11.9
DROSHAQ9NRR4 BCAM-209ENST00000590624 991 ntTSL 1 (best)30.66■■■□□ 2.53e-6■■□□□ 11.9
DROSHAQ9NRR4 AC145207.2-201ENST00000576021 479 ntTSL 330.45■■■□□ 2.473e-6■■□□□ 11.9
DROSHAQ9NRR4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.262e-11■■□□□ 11.9
DROSHAQ9NRR4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC29.17■■■□□ 2.263e-6■■□□□ 11.9
DROSHAQ9NRR4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.153e-6■■□□□ 11.9
Retrieved 100 of 16,331 protein–RNA pairs in 81.8 ms