RNA–Protein interactions for RNA: ENST00000484907.1

CDC16-208, Transcript of cell division cycle 16, humanhuman

TSL 3

Gene CDC16, Length 1,038 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC16-208ENST00000484907 AEBP2Q6ZN18 517 aaPredicted RBP31.41■■■□□ 2.62
CDC16-208ENST00000484907 CHIC1Q5VXU3 224 aa30.08■■■□□ 2.41
CDC16-208ENST00000484907 SENP3Q9H4L4 574 aaPredicted RBP26.79■■□□□ 1.88
CDC16-208ENST00000484907 PHF23Q9BUL5 403 aaPredicted RBP26.46■■□□□ 1.83
CDC16-208ENST00000484907 FOXD1Q16676 465 aa24.92■■□□□ 1.58
CDC16-208ENST00000484907 PLPPR3Q6T4P5 718 aa24.15■■□□□ 1.46
CDC16-208ENST00000484907 PPP6R1Q9UPN7 881 aa23.47■■□□□ 1.35
CDC16-208ENST00000484907 ADRA2BP18089 450 aa23.41■■□□□ 1.34
CDC16-208ENST00000484907 PIAS4Q8N2W9 510 aaPredicted RBP23.36■■□□□ 1.33
CDC16-208ENST00000484907 NISCHQ9Y2I1 1504 aa23.29■■□□□ 1.32
CDC16-208ENST00000484907 MSH5O43196 834 aa23.26■■□□□ 1.31
CDC16-208ENST00000484907 POTEDQ86YR6 584 aa22.27■■□□□ 1.16
CDC16-208ENST00000484907 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
CDC16-208ENST00000484907 MAPK8IP2Q13387 824 aaPredicted RBP21.42■■□□□ 1.02
CDC16-208ENST00000484907 DMRT2Q9Y5R5 561 aa21.28■■□□□ 1
CDC16-208ENST00000484907 PPP4R3CPQ6ZMV5 832 aa21.19■□□□□ 0.98
CDC16-208ENST00000484907 CNKSR2Q8WXI2 1034 aa20.75■□□□□ 0.91
CDC16-208ENST00000484907 HOXD11P31277 338 aaPredicted RBP20.59■□□□□ 0.89
CDC16-208ENST00000484907 RNF216Q9NWF9 866 aaPredicted RBP20.5■□□□□ 0.87
CDC16-208ENST00000484907 NCBP3Q53F19 620 aaKnown RBP20.47■□□□□ 0.87
CDC16-208ENST00000484907 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
CDC16-208ENST00000484907 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
CDC16-208ENST00000484907 CCDC180Q9P1Z9 1646 aa20.1■□□□□ 0.81
CDC16-208ENST00000484907 KCNA4P22459 653 aa19.98■□□□□ 0.79
CDC16-208ENST00000484907 RNF39Q9H2S5 420 aa19.86■□□□□ 0.77
CDC16-208ENST00000484907 DNAJC5BQ9UF47 199 aa19.85■□□□□ 0.77
CDC16-208ENST00000484907 CACNB1Q02641 598 aaPredicted RBP19.8■□□□□ 0.76
CDC16-208ENST00000484907 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.733e-17■■■□□ 16.4
CDC16-208ENST00000484907 C1QBPQ07021 282 aaKnown RBP19.59■□□□□ 0.73
CDC16-208ENST00000484907 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
CDC16-208ENST00000484907 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
CDC16-208ENST00000484907 U3KPZ7 1027 aaPredicted RBP19.23■□□□□ 0.67
CDC16-208ENST00000484907 SLC4A2P04920 1241 aa19.18■□□□□ 0.66
CDC16-208ENST00000484907 DCAF8L2P0C7V8 631 aa19.13■□□□□ 0.65
CDC16-208ENST00000484907 SHROOM4Q9ULL8 1493 aa19.05■□□□□ 0.64
CDC16-208ENST00000484907 MYO15BQ96JP2 1530 aa19.04■□□□□ 0.64
CDC16-208ENST00000484907 SLC4A1APQ9BWU0 796 aaKnown RBP18.91■□□□□ 0.62
CDC16-208ENST00000484907 SPINK5Q9NQ38 1064 aaPredicted RBP18.87■□□□□ 0.61
CDC16-208ENST00000484907 CAPN15O75808 1086 aa18.84■□□□□ 0.61
CDC16-208ENST00000484907 ABCC9O60706 1549 aa18.81■□□□□ 0.6
CDC16-208ENST00000484907 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
CDC16-208ENST00000484907 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
CDC16-208ENST00000484907 NACADO15069 1562 aa18.76■□□□□ 0.59
CDC16-208ENST00000484907 APLP2Q06481 763 aa18.76■□□□□ 0.59
CDC16-208ENST00000484907 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
CDC16-208ENST00000484907 MYCNP04198 464 aaPredicted RBP18.66■□□□□ 0.58
CDC16-208ENST00000484907 DSG3P32926 999 aa18.66■□□□□ 0.58
CDC16-208ENST00000484907 TRHP20396 242 aaPredicted RBP18.59■□□□□ 0.57
CDC16-208ENST00000484907 ZNF219Q9P2Y4 722 aaPredicted RBP18.59■□□□□ 0.57
CDC16-208ENST00000484907 FOXD4L1Q9NU39 408 aa18.58■□□□□ 0.56
CDC16-208ENST00000484907 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
CDC16-208ENST00000484907 RB1CC1Q8TDY2 1594 aa18.51■□□□□ 0.55
CDC16-208ENST00000484907 SCRIBQ14160 1630 aa18.45■□□□□ 0.54
CDC16-208ENST00000484907 ABCB7O75027 752 aa18.42■□□□□ 0.54
CDC16-208ENST00000484907 ZBTB22O15209 634 aa18.36■□□□□ 0.53
CDC16-208ENST00000484907 RSF1Q96T23 1441 aaPredicted RBP18.2■□□□□ 0.5
CDC16-208ENST00000484907 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
CDC16-208ENST00000484907 POLA2Q14181 598 aa18.15■□□□□ 0.5
CDC16-208ENST00000484907 CECR2Q9BXF3 1484 aa18.05■□□□□ 0.48
CDC16-208ENST00000484907 ATXN8OSP0DMR3 200 aa18■□□□□ 0.47
CDC16-208ENST00000484907 MROH2BQ7Z745 1585 aa17.96■□□□□ 0.47
CDC16-208ENST00000484907 UNC13AQ9UPW8 1703 aa17.95■□□□□ 0.46
CDC16-208ENST00000484907 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
CDC16-208ENST00000484907 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
CDC16-208ENST00000484907 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
CDC16-208ENST00000484907 RBM42Q9BTD8 480 aaKnown RBP17.84■□□□□ 0.45
CDC16-208ENST00000484907 ZBTB12Q9Y330 459 aaPredicted RBP17.84■□□□□ 0.45
CDC16-208ENST00000484907 SMARCA4P51532 1647 aa17.77■□□□□ 0.44
CDC16-208ENST00000484907 WIZO95785 1651 aa17.74■□□□□ 0.43
CDC16-208ENST00000484907 CSRNP3Q8WYN3 585 aa17.72■□□□□ 0.43
CDC16-208ENST00000484907 TOP2AP11388 1531 aaKnown RBP17.65■□□□□ 0.42
CDC16-208ENST00000484907 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
CDC16-208ENST00000484907 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
CDC16-208ENST00000484907 OSCARQ8IYS5 282 aa17.56■□□□□ 0.4
CDC16-208ENST00000484907 CCDC88BA6NC98 1476 aa17.52■□□□□ 0.4
CDC16-208ENST00000484907 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.4
CDC16-208ENST00000484907 POTEHQ6S545 545 aa17.51■□□□□ 0.39
CDC16-208ENST00000484907 SMARCA2P51531 1590 aa17.49■□□□□ 0.39
CDC16-208ENST00000484907 FBLN2P98095 1184 aa17.48■□□□□ 0.39
CDC16-208ENST00000484907 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
CDC16-208ENST00000484907 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
CDC16-208ENST00000484907 NCAPD3P42695 1498 aa17.39■□□□□ 0.37
CDC16-208ENST00000484907 EIF4G1Q04637 1599 aaKnown RBP17.39■□□□□ 0.37
CDC16-208ENST00000484907 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
CDC16-208ENST00000484907 MKRN4PQ13434 485 aaPredicted RBP17.36■□□□□ 0.37
CDC16-208ENST00000484907 CHRDL2Q6WN34 429 aa17.34■□□□□ 0.37
CDC16-208ENST00000484907 HMGXB3Q12766 1538 aa17.29■□□□□ 0.36
CDC16-208ENST00000484907 SPDYE2BA6NHP3 402 aa17.28■□□□□ 0.36
CDC16-208ENST00000484907 SPDYE6P0CI01 402 aa17.28■□□□□ 0.36
CDC16-208ENST00000484907 SPDYE2Q495Y8 402 aa17.28■□□□□ 0.36
CDC16-208ENST00000484907 REM2Q8IYK8 340 aaPredicted RBP17.28■□□□□ 0.36
CDC16-208ENST00000484907 LOC105371045A0A1W2PR82 267 aa17.23■□□□□ 0.35
CDC16-208ENST00000484907 PITPNM1O00562 1244 aa17.1■□□□□ 0.33
CDC16-208ENST00000484907 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
CDC16-208ENST00000484907 ABCC8Q09428 1581 aa17.1■□□□□ 0.33
CDC16-208ENST00000484907 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
CDC16-208ENST00000484907 SSUH2Q9Y2M2 353 aa17.08■□□□□ 0.32
CDC16-208ENST00000484907 FAM9AQ8IZU1 332 aaPredicted RBP17.06■□□□□ 0.32
CDC16-208ENST00000484907 EEA1Q15075 1411 aa17.04■□□□□ 0.32
CDC16-208ENST00000484907 CFTRP13569 1480 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms