Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 AL592071.1-201ENST00000611956 408 ntBASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MKKSQ9NPJ1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 LINC01126-201ENST00000623515 1646 ntBASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 TPSP2-201ENST00000561760 610 ntBASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 MIR3652-201ENST00000579335 131 ntBASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 AC124864.1-201ENST00000623408 392 ntBASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MKKSQ9NPJ1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 TSPY12P-201ENST00000421279 868 ntBASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 RN7SL606P-201ENST00000472779 293 ntBASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 VENTXP7-201ENST00000475503 772 ntBASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MKKSQ9NPJ1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms