Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 AC024243.1-201ENST00000609234 778 ntBASIC19.01■□□□□ 0.63
CD248Q9HCU0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CD248Q9HCU0 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CD248Q9HCU0 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19■□□□□ 0.63
CD248Q9HCU0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19■□□□□ 0.63
CD248Q9HCU0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC19■□□□□ 0.63
CD248Q9HCU0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CD248Q9HCU0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19■□□□□ 0.63
CD248Q9HCU0 AL645929.1-201ENST00000420084 975 ntBASIC19■□□□□ 0.63
CD248Q9HCU0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
CD248Q9HCU0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19■□□□□ 0.63
CD248Q9HCU0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19■□□□□ 0.63
CD248Q9HCU0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19■□□□□ 0.63
CD248Q9HCU0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19■□□□□ 0.63
CD248Q9HCU0 AC079602.3-201ENST00000623931 403 ntBASIC19■□□□□ 0.63
CD248Q9HCU0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19■□□□□ 0.63
CD248Q9HCU0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
CD248Q9HCU0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19■□□□□ 0.63
CD248Q9HCU0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CD248Q9HCU0 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CD248Q9HCU0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19■□□□□ 0.63
CD248Q9HCU0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19■□□□□ 0.63
CD248Q9HCU0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CD248Q9HCU0 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CD248Q9HCU0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.99■□□□□ 0.63
CD248Q9HCU0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.99■□□□□ 0.63
CD248Q9HCU0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.99■□□□□ 0.63
CD248Q9HCU0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.99■□□□□ 0.63
CD248Q9HCU0 AC034232.1-201ENST00000506026 1064 ntBASIC18.99■□□□□ 0.63
CD248Q9HCU0 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.99■□□□□ 0.63
CD248Q9HCU0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.99■□□□□ 0.63
CD248Q9HCU0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CD248Q9HCU0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD248Q9HCU0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 MCCD1P1-208ENST00000445732 328 ntBASIC18.98■□□□□ 0.63
CD248Q9HCU0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CD248Q9HCU0 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD248Q9HCU0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms