Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
SND1-IT1Q9HBX3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
SND1-IT1Q9HBX3 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
SND1-IT1Q9HBX3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
SND1-IT1Q9HBX3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
SND1-IT1Q9HBX3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 GUSBP6-202ENST00000438529 1198 ntBASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 AC083880.1-201ENST00000608266 535 ntBASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 NKILA-202ENST00000614771 2598 ntBASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
SND1-IT1Q9HBX3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 KRT8P3-201ENST00000519669 1449 ntBASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 AC011676.5-201ENST00000624864 2660 ntBASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 POU5F1P3-201ENST00000428824 1078 ntBASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SND1-IT1Q9HBX3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms