Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC012640.2-201ENST00000561606 901 ntBASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 AL139288.1-201ENST00000623748 933 ntBASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPAP3Q9H6T3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 IGHV3-22-201ENST00000520721 359 ntBASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 NKAPP1-205ENST00000585790 367 ntBASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 TERC-201ENST00000602385 541 ntBASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 AC139530.3-201ENST00000620344 690 ntBASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 AP000867.4-201ENST00000641616 219 ntBASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPAP3Q9H6T3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 AC092910.1-201ENST00000482027 1129 ntBASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 HLA-J-201ENST00000462773 1622 ntBASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 AC120498.9-201ENST00000339021 3867 ntBASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 PMS2P7-201ENST00000506558 1336 ntBASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 AC097374.2-201ENST00000618617 1306 ntBASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.73■□□□□ 0.91
RPAP3Q9H6T3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 SLC25A24-204ENST00000569674 2357 ntBASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 AC104109.2-201ENST00000602919 1418 ntBASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 AC092865.5-201ENST00000545435 363 ntBASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 MTDHP4-201ENST00000600287 670 ntBASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RPAP3Q9H6T3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RPAP3Q9H6T3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms