Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
C11orf49Q9H6J7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 FAM58CP-201ENST00000435741 640 ntBASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 AC004877.2-201ENST00000623941 599 ntBASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
C11orf49Q9H6J7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 LINC01006-201ENST00000333319 2292 ntBASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 HLA-J-202ENST00000469281 1241 ntBASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 AC190387.1-201ENST00000551683 408 ntBASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 AC073592.5-201ENST00000624854 528 ntBASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
C11orf49Q9H6J7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 IGLL3P-201ENST00000412472 434 ntBASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 BCAR1-209ENST00000546196 1340 ntBASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.72■□□□□ 0.75
C11orf49Q9H6J7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 AL020989.1-201ENST00000422979 469 ntBASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 AC025678.2-201ENST00000562061 970 ntBASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 AC005498.2-205ENST00000593218 784 ntBASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
C11orf49Q9H6J7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms