Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 SIRPAP1-201ENST00000448467 1770 ntBASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 AC010653.2-201ENST00000623505 997 ntBASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 AC116562.4-202ENST00000641738 218 ntBASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
POLR2J3Q9H1A7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 RBM17P1-201ENST00000453646 1190 ntBASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 FITM1-202ENST00000559294 800 ntBASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
POLR2J3Q9H1A7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 Z99916.2-201ENST00000604037 246 ntBASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 AC112497.1-201ENST00000624824 639 ntBASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
POLR2J3Q9H1A7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
POLR2J3Q9H1A7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms