Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AL158047.1-201ENST00000445918 881 ntBASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 AC099343.3-201ENST00000605834 2503 ntBASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.35■□□□□ 0.53
PHACTR1Q9C0D0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 AL121761.2-201ENST00000598007 1648 ntBASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 LINC00602-201ENST00000629776 2065 ntBASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 AC098590.1-201ENST00000468126 897 ntBASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 AC010240.3-201ENST00000607688 395 ntBASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.34■□□□□ 0.53
PHACTR1Q9C0D0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 LINC00304-203ENST00000565008 1864 ntBASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PHACTR1Q9C0D0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 GCSHP5-201ENST00000443090 522 ntBASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 CCR12P-201ENST00000446203 998 ntBASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 BX088651.1-201ENST00000540551 451 ntBASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 AL049637.2-201ENST00000641778 930 ntBASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PHACTR1Q9C0D0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms