Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 GPAT2P1-201ENST00000444924 1672 ntBASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.69■□□□□ 0.58
FOXP3Q9BZS1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 AK4P3-201ENST00000418260 669 ntBASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 AC096733.2-201ENST00000609937 1394 ntBASIC18.68■□□□□ 0.58
FOXP3Q9BZS1 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FOXP3Q9BZS1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 BX664615.1-201ENST00000443558 458 ntBASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 CA15P1-201ENST00000481698 905 ntBASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 MIR3180-5-201ENST00000583743 153 ntBASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 AC116562.4-202ENST00000641738 218 ntBASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FOXP3Q9BZS1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FOXP3Q9BZS1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms