Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 OR6C7P-201ENST00000547875 934 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC026803.1-201ENST00000569130 274 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 PSME3-213ENST00000592169 826 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC027243.2-201ENST00000602530 724 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 YWHAQP7-201ENST00000603536 658 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC126118.1-201ENST00000607744 628 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC092757.3-201ENST00000619686 543 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AL136221.1-201ENST00000621449 509 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC022413.1-201ENST00000624602 984 ntBASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 THRB-AS1-205ENST00000609230 1318 ntTSL 5 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 OR6F1-203ENST00000641444 1698 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 AC010624.1-201ENST00000527209 1525 ntTSL 2 BASIC11.3□□□□□ -0.6
KRTAP3-3Q9BYR6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 PTN-202ENST00000393083 1599 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 KRT18P10-201ENST00000388836 1287 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 SFR1P1-201ENST00000403720 688 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 SULT1C4-202ENST00000409309 1045 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 UBE2V1P11-201ENST00000411559 285 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AC092570.3-201ENST00000420113 693 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 CLCN3P1-201ENST00000423965 1017 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 RPL6P30-201ENST00000443382 862 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 BMS1P10-201ENST00000443754 1120 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 SPTLC1P1-201ENST00000447199 261 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 SPTLC1P5-201ENST00000450718 252 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AC117522.1-201ENST00000509821 380 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 OR9L1P-201ENST00000529493 933 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AC084033.2-201ENST00000551532 967 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 MTND4P33-201ENST00000556706 766 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 RN7SKP299-201ENST00000606679 301 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AC024257.5-201ENST00000612739 531 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 ANOS2P-203ENST00000472227 1816 ntBASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 PCNX2-213ENST00000488780 1465 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
KRTAP3-3Q9BYR6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 PDLIM5-210ENST00000508216 1794 ntTSL 2 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 NR1H4-201ENST00000188403 1630 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 AL354685.2-201ENST00000448218 1447 ntBASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 BEND6-201ENST00000370745 579 ntTSL 5 BASIC11.28□□□□□ -0.6
KRTAP3-3Q9BYR6 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms