Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 TUBB8P6-201ENST00000436895 1288 ntBASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 KRT18P14-201ENST00000534205 1250 ntBASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 MAX-217ENST00000557277 728 ntTSL 3 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 RCC2P6-201ENST00000526625 1557 ntBASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 AL139384.1-201ENST00000612143 3047 ntBASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 NFYC-AS1-201ENST00000606277 1687 ntBASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LCE3DQ9BYE3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 AC018695.7-201ENST00000624587 2492 ntBASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
LCE3DQ9BYE3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms