Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 AC011498.5-201ENST00000592027 486 ntBASIC12.61□□□□□ -0.39
UPK3BQ9BT76 AL121672.3-201ENST00000608644 468 ntBASIC12.61□□□□□ -0.39
UPK3BQ9BT76 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 AL163051.1-201ENST00000569214 1512 ntBASIC12.61□□□□□ -0.39
UPK3BQ9BT76 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UPK3BQ9BT76 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 MIR149-201ENST00000384879 89 ntBASIC12.6□□□□□ -0.39
UPK3BQ9BT76 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 ATP5G2P1-201ENST00000433580 426 ntBASIC12.6□□□□□ -0.39
UPK3BQ9BT76 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UPK3BQ9BT76 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms