Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC23.91■■□□□ 1.42
ABCA3Q99758 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC23.91■■□□□ 1.42
ABCA3Q99758 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 PTMS-202ENST00000389462 773 ntTSL 2 BASIC23.91■■□□□ 1.42
ABCA3Q99758 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC23.91■■□□□ 1.42
ABCA3Q99758 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ABCA3Q99758 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.9■■□□□ 1.42
ABCA3Q99758 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ABCA3Q99758 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.9■■□□□ 1.42
ABCA3Q99758 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
ABCA3Q99758 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ABCA3Q99758 RHOQP3-201ENST00000437982 621 ntBASIC23.9■■□□□ 1.42
ABCA3Q99758 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC23.9■■□□□ 1.42
ABCA3Q99758 VN2R19P-201ENST00000442399 1052 ntBASIC23.9■■□□□ 1.42
ABCA3Q99758 S100A2-206ENST00000497140 697 ntTSL 2 BASIC23.9■■□□□ 1.42
ABCA3Q99758 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC23.9■■□□□ 1.42
ABCA3Q99758 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.9■■□□□ 1.42
ABCA3Q99758 AL513210.1-201ENST00000629608 234 ntBASIC23.9■■□□□ 1.42
ABCA3Q99758 AC092902.6-201ENST00000641783 218 ntBASIC23.9■■□□□ 1.42
ABCA3Q99758 AC132938.5-201ENST00000624980 1813 ntBASIC23.9■■□□□ 1.42
ABCA3Q99758 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ABCA3Q99758 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ABCA3Q99758 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ABCA3Q99758 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
ABCA3Q99758 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ABCA3Q99758 AC005082.1-201ENST00000413042 2259 ntBASIC23.9■■□□□ 1.42
ABCA3Q99758 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
ABCA3Q99758 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
ABCA3Q99758 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
ABCA3Q99758 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC23.9■■□□□ 1.42
ABCA3Q99758 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC23.9■■□□□ 1.42
ABCA3Q99758 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC23.9■■□□□ 1.42
ABCA3Q99758 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC23.9■■□□□ 1.42
ABCA3Q99758 METTL23-205ENST00000588302 925 ntTSL 5 BASIC23.9■■□□□ 1.42
ABCA3Q99758 AC022145.2-201ENST00000598203 171 ntBASIC23.9■■□□□ 1.42
ABCA3Q99758 AC004790.2-201ENST00000623588 572 ntBASIC23.9■■□□□ 1.42
ABCA3Q99758 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC23.9■■□□□ 1.42
ABCA3Q99758 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ABCA3Q99758 AC093010.1-201ENST00000473625 1624 ntBASIC23.89■■□□□ 1.42
ABCA3Q99758 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.89■■□□□ 1.42
ABCA3Q99758 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.89■■□□□ 1.41
ABCA3Q99758 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ABCA3Q99758 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ABCA3Q99758 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC23.89■■□□□ 1.41
ABCA3Q99758 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.89■■□□□ 1.41
ABCA3Q99758 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
ABCA3Q99758 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC23.89■■□□□ 1.41
ABCA3Q99758 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.89■■□□□ 1.41
ABCA3Q99758 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC23.89■■□□□ 1.41
ABCA3Q99758 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ABCA3Q99758 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC23.89■■□□□ 1.41
ABCA3Q99758 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
ABCA3Q99758 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC23.89■■□□□ 1.41
ABCA3Q99758 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
ABCA3Q99758 AC009093.7-201ENST00000623853 1223 ntBASIC23.89■■□□□ 1.41
ABCA3Q99758 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
ABCA3Q99758 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
ABCA3Q99758 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
ABCA3Q99758 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC23.89■■□□□ 1.41
ABCA3Q99758 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ABCA3Q99758 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
ABCA3Q99758 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC23.88■■□□□ 1.41
ABCA3Q99758 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 AL020989.1-201ENST00000422979 469 ntBASIC23.88■■□□□ 1.41
ABCA3Q99758 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
ABCA3Q99758 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.88■■□□□ 1.41
ABCA3Q99758 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC23.88■■□□□ 1.41
ABCA3Q99758 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
ABCA3Q99758 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.88■■□□□ 1.41
ABCA3Q99758 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 FUT8-AS1-201ENST00000621019 1521 ntBASIC23.88■■□□□ 1.41
ABCA3Q99758 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.88■■□□□ 1.41
ABCA3Q99758 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
ABCA3Q99758 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.88■■□□□ 1.41
ABCA3Q99758 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ABCA3Q99758 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
ABCA3Q99758 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC23.87■■□□□ 1.41
ABCA3Q99758 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC23.87■■□□□ 1.41
ABCA3Q99758 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
ABCA3Q99758 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC23.87■■□□□ 1.41
ABCA3Q99758 AC004877.2-201ENST00000623941 599 ntBASIC23.87■■□□□ 1.41
ABCA3Q99758 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
ABCA3Q99758 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
ABCA3Q99758 GID4-202ENST00000376345 1391 ntTSL 3 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms