Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 AC093677.2-201ENST00000600169 1863 ntBASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 AC090164.3-201ENST00000610780 2143 ntBASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDK5RAP1Q96SZ6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 AC138932.1-201ENST00000534164 6830 ntBASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 AC091607.1-201ENST00000490318 1060 ntBASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 KRT18P31-201ENST00000506277 1292 ntBASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 AC138894.3-201ENST00000603787 634 ntBASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CDK5RAP1Q96SZ6 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDK5RAP1Q96SZ6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 AL096828.2-201ENST00000567259 1965 ntBASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 AC005336.2-201ENST00000593183 939 ntBASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 AL138831.2-201ENST00000606564 490 ntBASIC18.7■□□□□ 0.58
CDK5RAP1Q96SZ6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms