Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC005336.2-201ENST00000593183 939 ntBASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SLC46A1Q96NT5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC46A1Q96NT5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC46A1Q96NT5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC46A1Q96NT5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC46A1Q96NT5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SLC46A1Q96NT5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC46A1Q96NT5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.27■□□□□ 0.35
SLC46A1Q96NT5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC46A1Q96NT5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC46A1Q96NT5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 AC068472.1-201ENST00000474589 881 ntBASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 AC009533.2-201ENST00000543664 586 ntBASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC46A1Q96NT5 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 AC005104.2-201ENST00000427818 678 ntBASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC46A1Q96NT5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 AP001269.4-201ENST00000609611 512 ntBASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 AL138781.2-201ENST00000617896 1843 ntBASIC17.24■□□□□ 0.35
SLC46A1Q96NT5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.23■□□□□ 0.35
SLC46A1Q96NT5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms