Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 SLC25A6P5-201ENST00000435663 894 ntBASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 AC009078.2-202ENST00000463353 338 ntBASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 AC011498.5-201ENST00000592027 486 ntBASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.95■□□□□ 0.78
RPGRIP1Q96KN7 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 FZD10-202ENST00000539839 3282 ntBASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 AL121672.3-201ENST00000608644 468 ntBASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 AC016734.2-201ENST00000624325 1377 ntBASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.94■□□□□ 0.78
RPGRIP1Q96KN7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 AL022342.1-201ENST00000400363 863 ntBASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 MIR3180-1-201ENST00000580374 94 ntBASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 MIR3180-3-201ENST00000584616 94 ntBASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 AC004263.2-201ENST00000617183 678 ntBASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPGRIP1Q96KN7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPGRIP1Q96KN7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms