Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP6V0A1Q93050 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ATP6V0A1Q93050 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 AL022342.1-201ENST00000400363 863 ntBASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 PHGDH-209ENST00000641074 1780 ntBASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP6V0A1Q93050 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 AC068472.1-201ENST00000474589 881 ntBASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 AF238378.1-201ENST00000526806 358 ntBASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 BNIP3P18-201ENST00000593976 575 ntBASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP6V0A1Q93050 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ATP6V0A1Q93050 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
ATP6V0A1Q93050 AC093010.1-201ENST00000473625 1624 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms