Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.42■□□□□ 0.86
USP6NLQ92738 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
USP6NLQ92738 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 KRT18P27-201ENST00000427733 1299 ntBASIC20.42■□□□□ 0.86
USP6NLQ92738 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.42■□□□□ 0.86
USP6NLQ92738 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.42■□□□□ 0.86
USP6NLQ92738 RNA5SP416-201ENST00000516838 111 ntBASIC20.42■□□□□ 0.86
USP6NLQ92738 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.42■□□□□ 0.86
USP6NLQ92738 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.42■□□□□ 0.86
USP6NLQ92738 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.42■□□□□ 0.86
USP6NLQ92738 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
USP6NLQ92738 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.41■□□□□ 0.86
USP6NLQ92738 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.41■□□□□ 0.86
USP6NLQ92738 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.41■□□□□ 0.86
USP6NLQ92738 RPS8P6-201ENST00000426177 609 ntBASIC20.41■□□□□ 0.86
USP6NLQ92738 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.41■□□□□ 0.86
USP6NLQ92738 AC007967.2-201ENST00000432613 625 ntBASIC20.41■□□□□ 0.86
USP6NLQ92738 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.41■□□□□ 0.86
USP6NLQ92738 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.41■□□□□ 0.86
USP6NLQ92738 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
USP6NLQ92738 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 AC097374.2-201ENST00000618617 1306 ntBASIC20.41■□□□□ 0.86
USP6NLQ92738 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.41■□□□□ 0.86
USP6NLQ92738 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.41■□□□□ 0.86
USP6NLQ92738 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USP6NLQ92738 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.4■□□□□ 0.86
USP6NLQ92738 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
USP6NLQ92738 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.4■□□□□ 0.86
USP6NLQ92738 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC20.4■□□□□ 0.86
USP6NLQ92738 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.4■□□□□ 0.86
USP6NLQ92738 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.4■□□□□ 0.86
USP6NLQ92738 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.4■□□□□ 0.86
USP6NLQ92738 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.4■□□□□ 0.86
USP6NLQ92738 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USP6NLQ92738 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.4■□□□□ 0.86
USP6NLQ92738 AC073592.4-201ENST00000623827 446 ntBASIC20.4■□□□□ 0.86
USP6NLQ92738 AC079776.2-201ENST00000641154 1609 ntBASIC20.4■□□□□ 0.86
USP6NLQ92738 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.39■□□□□ 0.86
USP6NLQ92738 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.39■□□□□ 0.86
USP6NLQ92738 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP6NLQ92738 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USP6NLQ92738 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
USP6NLQ92738 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP6NLQ92738 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP6NLQ92738 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6NLQ92738 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6NLQ92738 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USP6NLQ92738 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6NLQ92738 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.39■□□□□ 0.85
USP6NLQ92738 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USP6NLQ92738 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP6NLQ92738 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.39■□□□□ 0.85
USP6NLQ92738 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.39■□□□□ 0.85
USP6NLQ92738 AC007967.3-201ENST00000434308 558 ntBASIC20.39■□□□□ 0.85
USP6NLQ92738 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
USP6NLQ92738 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.39■□□□□ 0.85
USP6NLQ92738 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6NLQ92738 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
USP6NLQ92738 LINC02084-201ENST00000606069 1096 ntBASIC20.39■□□□□ 0.85
USP6NLQ92738 AC079781.4-201ENST00000641908 219 ntBASIC20.39■□□□□ 0.85
USP6NLQ92738 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.39■□□□□ 0.85
USP6NLQ92738 AL499627.1-201ENST00000569373 2188 ntBASIC20.39■□□□□ 0.85
USP6NLQ92738 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
USP6NLQ92738 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
USP6NLQ92738 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USP6NLQ92738 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.39■□□□□ 0.85
USP6NLQ92738 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.39■□□□□ 0.85
USP6NLQ92738 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms