Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 AC002310.6-201ENST00000624451 1377 ntBASIC21.9■■□□□ 1.1
SNED1Q8TER0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SNED1Q8TER0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNED1Q8TER0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SNED1Q8TER0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.89■■□□□ 1.1
SNED1Q8TER0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
SNED1Q8TER0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SNED1Q8TER0 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC21.89■■□□□ 1.1
SNED1Q8TER0 AC122714.2-201ENST00000502787 707 ntBASIC21.89■■□□□ 1.1
SNED1Q8TER0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.89■■□□□ 1.1
SNED1Q8TER0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC21.89■■□□□ 1.1
SNED1Q8TER0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SNED1Q8TER0 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNED1Q8TER0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
SNED1Q8TER0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNED1Q8TER0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNED1Q8TER0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNED1Q8TER0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNED1Q8TER0 KRT8P47-201ENST00000604727 1398 ntBASIC21.89■■□□□ 1.09
SNED1Q8TER0 KRT18P28-201ENST00000453838 1332 ntBASIC21.89■■□□□ 1.09
SNED1Q8TER0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.89■■□□□ 1.09
SNED1Q8TER0 PGM5P2-202ENST00000637225 1043 ntBASIC21.89■■□□□ 1.09
SNED1Q8TER0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNED1Q8TER0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNED1Q8TER0 AC004817.3-201ENST00000602957 2129 ntBASIC21.88■■□□□ 1.09
SNED1Q8TER0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNED1Q8TER0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNED1Q8TER0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNED1Q8TER0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNED1Q8TER0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNED1Q8TER0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 AC092865.6-201ENST00000642101 219 ntBASIC21.88■■□□□ 1.09
SNED1Q8TER0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
SNED1Q8TER0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 MIR1199-201ENST00000621445 119 ntBASIC21.87■■□□□ 1.09
SNED1Q8TER0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.87■■□□□ 1.09
SNED1Q8TER0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNED1Q8TER0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms