Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHD6Q8TD26 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 MTCL1P1-201ENST00000446207 792 ntBASIC16.15■□□□□ 0.18
CHD6Q8TD26 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 AC006116.8-202ENST00000587620 1550 ntBASIC16.15■□□□□ 0.18
CHD6Q8TD26 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 SPDYE11-202ENST00000450699 704 ntBASIC16.15■□□□□ 0.18
CHD6Q8TD26 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.15■□□□□ 0.18
CHD6Q8TD26 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.15■□□□□ 0.18
CHD6Q8TD26 AC104794.3-201ENST00000566840 1248 ntBASIC16.15■□□□□ 0.18
CHD6Q8TD26 SPDYE9P-201ENST00000570642 692 ntBASIC16.15■□□□□ 0.18
CHD6Q8TD26 SPDYE10P-202ENST00000612005 668 ntBASIC16.15■□□□□ 0.18
CHD6Q8TD26 SPDYE8P-202ENST00000612377 668 ntBASIC16.15■□□□□ 0.18
CHD6Q8TD26 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD6Q8TD26 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD6Q8TD26 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD6Q8TD26 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHD6Q8TD26 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHD6Q8TD26 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHD6Q8TD26 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
CHD6Q8TD26 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD6Q8TD26 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHD6Q8TD26 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD6Q8TD26 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CHD6Q8TD26 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.14■□□□□ 0.17
CHD6Q8TD26 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CHD6Q8TD26 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.14■□□□□ 0.17
CHD6Q8TD26 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CHD6Q8TD26 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD6Q8TD26 MYCLP1-201ENST00000372451 1075 ntBASIC16.13■□□□□ 0.17
CHD6Q8TD26 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHD6Q8TD26 SNX29P1-201ENST00000548357 1007 ntBASIC16.13■□□□□ 0.17
CHD6Q8TD26 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD6Q8TD26 AC004706.3-202ENST00000621574 984 ntBASIC16.13■□□□□ 0.17
CHD6Q8TD26 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD6Q8TD26 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD6Q8TD26 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 AC009102.3-201ENST00000623118 1491 ntBASIC16.13■□□□□ 0.17
CHD6Q8TD26 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHD6Q8TD26 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CHD6Q8TD26 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHD6Q8TD26 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CHD6Q8TD26 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.13■□□□□ 0.17
CHD6Q8TD26 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 AL158211.3-201ENST00000607385 239 ntBASIC16.12■□□□□ 0.17
CHD6Q8TD26 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 AL049796.1-201ENST00000565336 1766 ntBASIC16.12■□□□□ 0.17
CHD6Q8TD26 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 AC006128.1-201ENST00000624704 1661 ntBASIC16.12■□□□□ 0.17
CHD6Q8TD26 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.12■□□□□ 0.17
CHD6Q8TD26 KRT8P50-201ENST00000562022 1438 ntBASIC16.12■□□□□ 0.17
CHD6Q8TD26 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CHD6Q8TD26 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms