Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NKX2-3Q8TAU0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NKX2-3Q8TAU0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NKX2-3Q8TAU0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.39■■□□□ 1.01
NKX2-3Q8TAU0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NKX2-3Q8TAU0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NKX2-3Q8TAU0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
NKX2-3Q8TAU0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
NKX2-3Q8TAU0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 AP000997.3-201ENST00000623333 2250 ntBASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 MIR1233-2-201ENST00000408138 82 ntBASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 MIR1233-1-201ENST00000408722 82 ntBASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 AC104819.1-201ENST00000504587 486 ntBASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 AF228730.7-201ENST00000641842 219 ntBASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.38■■□□□ 1.01
NKX2-3Q8TAU0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 TOB2P1-201ENST00000469761 992 ntBASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 AC113404.2-201ENST00000507884 177 ntBASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 AL353801.3-201ENST00000609898 542 ntBASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
NKX2-3Q8TAU0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 AC100803.2-201ENST00000562459 1963 ntBASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.36■■□□□ 1.01
NKX2-3Q8TAU0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.35■■□□□ 1.01
NKX2-3Q8TAU0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NKX2-3Q8TAU0 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NKX2-3Q8TAU0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NKX2-3Q8TAU0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
NKX2-3Q8TAU0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NKX2-3Q8TAU0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
NKX2-3Q8TAU0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NKX2-3Q8TAU0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms