Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTL9Q8NET4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
RTL9Q8NET4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTL9Q8NET4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTL9Q8NET4 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 HNRNPDP1-201ENST00000439535 754 ntBASIC22.19■■□□□ 1.14
RTL9Q8NET4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 SART3-203ENST00000546611 1184 ntBASIC22.19■■□□□ 1.14
RTL9Q8NET4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 AL139288.1-201ENST00000623748 933 ntBASIC22.19■■□□□ 1.14
RTL9Q8NET4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RTL9Q8NET4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC22.19■■□□□ 1.14
RTL9Q8NET4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
RTL9Q8NET4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.18■■□□□ 1.14
RTL9Q8NET4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.18■■□□□ 1.14
RTL9Q8NET4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.18■■□□□ 1.14
RTL9Q8NET4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.18■■□□□ 1.14
RTL9Q8NET4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.18■■□□□ 1.14
RTL9Q8NET4 AP000867.4-201ENST00000641616 219 ntBASIC22.18■■□□□ 1.14
RTL9Q8NET4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
RTL9Q8NET4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RTL9Q8NET4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
RTL9Q8NET4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 AC021087.4-201ENST00000563761 564 ntBASIC22.17■■□□□ 1.14
RTL9Q8NET4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RTL9Q8NET4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
RTL9Q8NET4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTL9Q8NET4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTL9Q8NET4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTL9Q8NET4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTL9Q8NET4 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 AC122714.2-201ENST00000502787 707 ntBASIC22.16■■□□□ 1.14
RTL9Q8NET4 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
RTL9Q8NET4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTL9Q8NET4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTL9Q8NET4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTL9Q8NET4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RTL9Q8NET4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
RTL9Q8NET4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTL9Q8NET4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RTL9Q8NET4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 AC139887.3-201ENST00000568585 713 ntBASIC22.15■■□□□ 1.14
RTL9Q8NET4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC22.15■■□□□ 1.14
RTL9Q8NET4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms