Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
DNAAF1Q8NEP3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.96■□□□□ 0.14
DNAAF1Q8NEP3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
DNAAF1Q8NEP3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.96■□□□□ 0.14
DNAAF1Q8NEP3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
DNAAF1Q8NEP3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 PHGDH-209ENST00000641074 1780 ntBASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 AC141586.5-201ENST00000624546 2050 ntBASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 AC108860.2-201ENST00000562760 2183 ntBASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 CA15P1-201ENST00000481698 905 ntBASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.95■□□□□ 0.14
DNAAF1Q8NEP3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 AP000593.1-201ENST00000393668 712 ntBASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 NUDT16P1-203ENST00000513809 620 ntBASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 GMCL1P1-201ENST00000463439 1581 ntBASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
DNAAF1Q8NEP3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 UBE2SP1-201ENST00000450587 669 ntBASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.93■□□□□ 0.14
DNAAF1Q8NEP3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms