Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 AC141257.4-201ENST00000634557 245 ntBASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 AC136944.6-201ENST00000634818 245 ntBASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 KRT18P55-202ENST00000578578 1546 ntBASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.59■□□□□ 0.25
LSMEM1Q8N8F7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSMEM1Q8N8F7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSMEM1Q8N8F7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
LSMEM1Q8N8F7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSMEM1Q8N8F7 AC134043.2-201ENST00000624206 2238 ntBASIC16.58■□□□□ 0.25
LSMEM1Q8N8F7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSMEM1Q8N8F7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LSMEM1Q8N8F7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.58■□□□□ 0.25
LSMEM1Q8N8F7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LSMEM1Q8N8F7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LSMEM1Q8N8F7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LSMEM1Q8N8F7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LSMEM1Q8N8F7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms