Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC116Q8IYX3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC116Q8IYX3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 FLJ13224-201ENST00000313737 1514 ntBASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 AL391807.1-203ENST00000604392 2365 ntBASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 STARP1-201ENST00000397973 869 ntBASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 AC005332.8-201ENST00000622750 2735 ntBASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC116Q8IYX3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 RCN1P1-201ENST00000400413 996 ntBASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 RN7SL850P-201ENST00000579959 291 ntBASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 AL136038.4-201ENST00000603606 1261 ntBASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 AC008764.6-201ENST00000595909 2069 ntBASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC116Q8IYX3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC116Q8IYX3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms