Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 KRT18P31-201ENST00000506277 1292 ntBASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 LINC01711-201ENST00000598340 967 ntBASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCN4BQ8IWT1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 KRT18P65-201ENST00000439811 1286 ntBASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCN4BQ8IWT1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 PHGDH-209ENST00000641074 1780 ntBASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCN4BQ8IWT1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.02■□□□□ 0.64
SCN4BQ8IWT1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms