Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 KRT18P65-201ENST00000439811 1286 ntBASIC20.13■□□□□ 0.81
TRIM50Q86XT4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.13■□□□□ 0.81
TRIM50Q86XT4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 HLA-A-201ENST00000376802 1334 ntBASIC20.12■□□□□ 0.81
TRIM50Q86XT4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.12■□□□□ 0.81
TRIM50Q86XT4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 AC125634.1-201ENST00000438758 1403 ntBASIC20.11■□□□□ 0.81
TRIM50Q86XT4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 AL022342.1-201ENST00000400363 863 ntBASIC20.11■□□□□ 0.81
TRIM50Q86XT4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRIM50Q86XT4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 AL662844.1-201ENST00000546340 181 ntBASIC20.1■□□□□ 0.81
TRIM50Q86XT4 AC008608.2-201ENST00000606089 416 ntBASIC20.1■□□□□ 0.81
TRIM50Q86XT4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 AC148477.8-201ENST00000624298 468 ntBASIC20.1■□□□□ 0.81
TRIM50Q86XT4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
TRIM50Q86XT4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms