Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
USP50Q70EL3 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
USP50Q70EL3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.22■□□□□ 0.99
USP50Q70EL3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.22■□□□□ 0.99
USP50Q70EL3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
USP50Q70EL3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
USP50Q70EL3 DDT-204ENST00000404092 805 ntTSL 3 BASIC21.22■□□□□ 0.99
USP50Q70EL3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.22■□□□□ 0.99
USP50Q70EL3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC21.22■□□□□ 0.99
USP50Q70EL3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC21.22■□□□□ 0.99
USP50Q70EL3 KRT19P2-202ENST00000557173 1012 ntBASIC21.22■□□□□ 0.99
USP50Q70EL3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
USP50Q70EL3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.22■□□□□ 0.99
USP50Q70EL3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.21■□□□□ 0.99
USP50Q70EL3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.21■□□□□ 0.99
USP50Q70EL3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
USP50Q70EL3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.21■□□□□ 0.99
USP50Q70EL3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 FAM58CP-201ENST00000435741 640 ntBASIC21.21■□□□□ 0.99
USP50Q70EL3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.21■□□□□ 0.99
USP50Q70EL3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC21.21■□□□□ 0.99
USP50Q70EL3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.21■□□□□ 0.99
USP50Q70EL3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.21■□□□□ 0.99
USP50Q70EL3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
USP50Q70EL3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.21■□□□□ 0.99
USP50Q70EL3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.21■□□□□ 0.99
USP50Q70EL3 AL513210.1-201ENST00000629608 234 ntBASIC21.21■□□□□ 0.99
USP50Q70EL3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.21■□□□□ 0.99
USP50Q70EL3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
USP50Q70EL3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 BCAR1-209ENST00000546196 1340 ntBASIC21.21■□□□□ 0.99
USP50Q70EL3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
USP50Q70EL3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
USP50Q70EL3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
USP50Q70EL3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
USP50Q70EL3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
USP50Q70EL3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.2■□□□□ 0.98
USP50Q70EL3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21.2■□□□□ 0.98
USP50Q70EL3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.2■□□□□ 0.98
USP50Q70EL3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.2■□□□□ 0.98
USP50Q70EL3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.2■□□□□ 0.98
USP50Q70EL3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.2■□□□□ 0.98
USP50Q70EL3 AC025678.2-201ENST00000562061 970 ntBASIC21.2■□□□□ 0.98
USP50Q70EL3 MIR4745-201ENST00000577608 62 ntBASIC21.2■□□□□ 0.98
USP50Q70EL3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC21.2■□□□□ 0.98
USP50Q70EL3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
USP50Q70EL3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
USP50Q70EL3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.2■□□□□ 0.98
USP50Q70EL3 AC010507.1-201ENST00000633895 436 ntBASIC21.2■□□□□ 0.98
USP50Q70EL3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
USP50Q70EL3 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
USP50Q70EL3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP50Q70EL3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
USP50Q70EL3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP50Q70EL3 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP50Q70EL3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
USP50Q70EL3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
USP50Q70EL3 MRPL20P1-201ENST00000400819 433 ntBASIC21.19■□□□□ 0.98
USP50Q70EL3 RHOQP3-201ENST00000437982 621 ntBASIC21.19■□□□□ 0.98
USP50Q70EL3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP50Q70EL3 AC074386.1-202ENST00000463561 864 ntBASIC21.19■□□□□ 0.98
USP50Q70EL3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.19■□□□□ 0.98
USP50Q70EL3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.19■□□□□ 0.98
USP50Q70EL3 AC190387.1-201ENST00000551683 408 ntBASIC21.19■□□□□ 0.98
USP50Q70EL3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.19■□□□□ 0.98
USP50Q70EL3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
USP50Q70EL3 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.19■□□□□ 0.98
USP50Q70EL3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP50Q70EL3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.19■□□□□ 0.98
USP50Q70EL3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC21.19■□□□□ 0.98
USP50Q70EL3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
USP50Q70EL3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms