Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GDPD4Q6W3E5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 DUTP2-201ENST00000519164 463 ntBASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 AL121772.3-201ENST00000610840 674 ntBASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GDPD4Q6W3E5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 AC005336.2-201ENST00000593183 939 ntBASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 AC138894.3-201ENST00000603787 634 ntBASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
GDPD4Q6W3E5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 AC022898.2-201ENST00000616822 1312 ntBASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 TSPY19P-201ENST00000418461 509 ntBASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 TSPY18P-201ENST00000441642 509 ntBASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GDPD4Q6W3E5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GDPD4Q6W3E5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.08■□□□□ 0.48
GDPD4Q6W3E5 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
GDPD4Q6W3E5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.08■□□□□ 0.48
GDPD4Q6W3E5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.08■□□□□ 0.48
GDPD4Q6W3E5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms