Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AC012317.2-201ENST00000623305 2251 ntBASIC16.66■□□□□ 0.26
ZNF544Q6NX49 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AC011506.1-201ENST00000474329 610 ntBASIC16.66■□□□□ 0.26
ZNF544Q6NX49 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AL160286.2-201ENST00000567150 934 ntBASIC16.66■□□□□ 0.26
ZNF544Q6NX49 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AC005363.2-201ENST00000618631 242 ntBASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AC130371.2-201ENST00000619443 611 ntBASIC16.66■□□□□ 0.26
ZNF544Q6NX49 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ZNF544Q6NX49 FER1L4-210ENST00000615531 5998 ntBASIC16.66■□□□□ 0.26
ZNF544Q6NX49 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 KRT8P9-201ENST00000558927 1449 ntBASIC16.65■□□□□ 0.26
ZNF544Q6NX49 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 AC004951.3-201ENST00000418645 1148 ntBASIC16.65■□□□□ 0.26
ZNF544Q6NX49 AL390955.1-201ENST00000428694 934 ntBASIC16.65■□□□□ 0.26
ZNF544Q6NX49 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.65■□□□□ 0.26
ZNF544Q6NX49 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF544Q6NX49 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 RCC2P6-201ENST00000526625 1557 ntBASIC16.64■□□□□ 0.25
ZNF544Q6NX49 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 AL391005.1-201ENST00000623953 2435 ntBASIC16.64■□□□□ 0.25
ZNF544Q6NX49 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 MIR1224-201ENST00000408193 85 ntBASIC16.64■□□□□ 0.25
ZNF544Q6NX49 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 AC097488.1-201ENST00000507834 756 ntBASIC16.64■□□□□ 0.25
ZNF544Q6NX49 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF544Q6NX49 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms