Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.82■□□□□ 0.6
TRNP1Q6NT89 AC116407.4-201ENST00000623319 1061 ntBASIC18.82■□□□□ 0.6
TRNP1Q6NT89 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRNP1Q6NT89 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 AC006116.8-202ENST00000587620 1550 ntBASIC18.81■□□□□ 0.6
TRNP1Q6NT89 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 SLC25A6P5-201ENST00000435663 894 ntBASIC18.81■□□□□ 0.6
TRNP1Q6NT89 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 AC011498.5-201ENST00000592027 486 ntBASIC18.81■□□□□ 0.6
TRNP1Q6NT89 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 AC134043.2-201ENST00000624206 2238 ntBASIC18.81■□□□□ 0.6
TRNP1Q6NT89 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRNP1Q6NT89 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 TSPY12P-201ENST00000421279 868 ntBASIC18.8■□□□□ 0.6
TRNP1Q6NT89 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 AC009154.2-201ENST00000621177 724 ntBASIC18.8■□□□□ 0.6
TRNP1Q6NT89 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRNP1Q6NT89 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 PCED1CP-201ENST00000419887 785 ntBASIC18.79■□□□□ 0.6
TRNP1Q6NT89 AL845331.1-201ENST00000424978 1190 ntBASIC18.79■□□□□ 0.6
TRNP1Q6NT89 TSPY22P-201ENST00000427496 604 ntBASIC18.79■□□□□ 0.6
TRNP1Q6NT89 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 AC068472.1-201ENST00000474589 881 ntBASIC18.79■□□□□ 0.6
TRNP1Q6NT89 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TRNP1Q6NT89 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms