Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 AC139713.2-201ENST00000641328 2723 ntBASIC18.98■□□□□ 0.63
RNF43Q68DV7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF43Q68DV7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RNF43Q68DV7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 KRT8P10-201ENST00000450021 1447 ntBASIC18.97■□□□□ 0.63
RNF43Q68DV7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 AC008764.6-201ENST00000595909 2069 ntBASIC18.97■□□□□ 0.63
RNF43Q68DV7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF43Q68DV7 AL162741.1-201ENST00000565563 1558 ntBASIC18.97■□□□□ 0.63
RNF43Q68DV7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF43Q68DV7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.96■□□□□ 0.63
RNF43Q68DV7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 AC092329.2-201ENST00000598402 547 ntBASIC18.96■□□□□ 0.63
RNF43Q68DV7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF43Q68DV7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF43Q68DV7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 NPAP1P7-201ENST00000613027 823 ntBASIC18.95■□□□□ 0.62
RNF43Q68DV7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF43Q68DV7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF43Q68DV7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms