Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AL499627.1-201ENST00000569373 2188 ntBASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LYSMD4Q5XG99 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 AC211486.1-202ENST00000416371 468 ntBASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 DNAJB3-202ENST00000449667 1266 ntBASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 AC211476.1-201ENST00000503899 468 ntBASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 AC064836.3-201ENST00000607928 673 ntBASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 AC097374.2-201ENST00000618617 1306 ntBASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LYSMD4Q5XG99 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 AC108751.1-201ENST00000490852 363 ntBASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LYSMD4Q5XG99 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms