Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 KRT18P27-201ENST00000427733 1299 ntBASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 AC007967.2-201ENST00000432613 625 ntBASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 AC002347.1-201ENST00000569543 541 ntBASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 AC073592.4-201ENST00000623827 446 ntBASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 AL022326.1-202ENST00000641533 845 ntBASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 AC134684.3-201ENST00000641758 218 ntBASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDCP2Q5VXM1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 RPS8P6-201ENST00000426177 609 ntBASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 PMPCAP1-201ENST00000508114 1576 ntBASIC17.11■□□□□ 0.33
CDCP2Q5VXM1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 BX005266.1-201ENST00000473402 457 ntBASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 AC027796.2-201ENST00000575326 344 ntBASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 PGM5P2-202ENST00000637225 1043 ntBASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 AL499627.1-201ENST00000569373 2188 ntBASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 AC087289.5-201ENST00000586076 3175 ntBASIC17.1■□□□□ 0.33
CDCP2Q5VXM1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
CDCP2Q5VXM1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP2Q5VXM1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.09■□□□□ 0.33
CDCP2Q5VXM1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP2Q5VXM1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDCP2Q5VXM1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDCP2Q5VXM1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms