Protein–RNA interactions for Protein: Q5EBL8

PDZD11, PDZ domain-containing protein 11, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11Q5EBL8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 FAM21FP-204ENST00000608637 956 ntBASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PDZD11Q5EBL8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 RARRES2P1-201ENST00000474487 481 ntBASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 SF1-220ENST00000626028 704 ntTSL 2 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 RASSF1-AS1-201ENST00000629828 790 ntBASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 AL603756.1-201ENST00000606511 2163 ntBASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PDZD11Q5EBL8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PDZD11Q5EBL8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms