Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AC112698.1-201ENST00000510299 916 ntBASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC21.12■□□□□ 0.97
CCDC178Q5BJE1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 KRT18P56-201ENST00000507275 550 ntBASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 MIR3652-201ENST00000579335 131 ntBASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCDC178Q5BJE1 AC009113.1-201ENST00000570267 2443 ntBASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 AL845331.1-201ENST00000424978 1190 ntBASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 AC104819.1-201ENST00000504587 486 ntBASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 AP000867.3-201ENST00000524675 377 ntBASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC178Q5BJE1 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 NUS1P1-201ENST00000446295 882 ntBASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 KRT17P6-201ENST00000453795 1220 ntBASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC178Q5BJE1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms