Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RFX7Q2KHR2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 KRT16P4-201ENST00000453883 522 ntBASIC21.83■■□□□ 1.08
RFX7Q2KHR2 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 AP002469.2-201ENST00000531724 424 ntBASIC21.83■■□□□ 1.08
RFX7Q2KHR2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 AC124864.1-201ENST00000623408 392 ntBASIC21.83■■□□□ 1.08
RFX7Q2KHR2 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.83■■□□□ 1.08
RFX7Q2KHR2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.83■■□□□ 1.08
RFX7Q2KHR2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 TSPY12P-201ENST00000421279 868 ntBASIC21.82■■□□□ 1.08
RFX7Q2KHR2 AP000347.1-202ENST00000435868 847 ntBASIC21.82■■□□□ 1.08
RFX7Q2KHR2 GUSBP12-201ENST00000513727 720 ntBASIC21.82■■□□□ 1.08
RFX7Q2KHR2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 BNIP3P18-201ENST00000593976 575 ntBASIC21.82■■□□□ 1.08
RFX7Q2KHR2 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 AC009154.2-201ENST00000621177 724 ntBASIC21.82■■□□□ 1.08
RFX7Q2KHR2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 LINC00602-201ENST00000629776 2065 ntBASIC21.82■■□□□ 1.08
RFX7Q2KHR2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
RFX7Q2KHR2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.81■■□□□ 1.08
RFX7Q2KHR2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 KRT18P55-202ENST00000578578 1546 ntBASIC21.81■■□□□ 1.08
RFX7Q2KHR2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RFX7Q2KHR2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 AL160237.2-201ENST00000556165 472 ntBASIC21.8■■□□□ 1.08
RFX7Q2KHR2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RFX7Q2KHR2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms